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Cluster: HRGMv2_0943_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0943_17 HRGMv2_0943_17_10 13581 15263 + 2.A.66.4.4
pfam HRGMv2_0943_17 HRGMv2_0943_17_11 15270 17210 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0943_17 HRGMv2_0943_17_12 17575 19188 + 3.A.1.5.27
TC HRGMv2_0943_17 HRGMv2_0943_17_13 19346 20302 + 3.A.1.5.38
TC HRGMv2_0943_17 HRGMv2_0943_17_14 20306 22321 + 3.A.1.5.25
TC HRGMv2_0943_17 HRGMv2_0943_17_15 22322 23149 + 3.A.1.5.27
CAZyme HRGMv2_0943_17 HRGMv2_0943_17_16 23281 24207 + CE7
Gene ID: HRGMv2_0943_17_10
Type: TC
Location: 13581 - 15263 (+)
Gene ID: HRGMv2_0943_17_11
Type: pfam
Location: 15270 - 17210 (+)
Gene ID: HRGMv2_0943_17_12
Type: TC
Location: 17575 - 19188 (+)
Gene ID: HRGMv2_0943_17_13
Type: TC
Location: 19346 - 20302 (+)
Gene ID: HRGMv2_0943_17_14
Type: TC
Location: 20306 - 22321 (+)
Gene ID: HRGMv2_0943_17_15
Type: TC
Location: 22322 - 23149 (+)
Gene ID: HRGMv2_0943_17_16
Type: CAZyme
Location: 23281 - 24207 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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