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Cluster: HRGMv2_0943_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0943_16 HRGMv2_0943_16_9 7525 8883 - 2.A.33.1.1
pfam HRGMv2_0943_16 HRGMv2_0943_16_10 9151 10074 - DHH | DHHA2
STP HRGMv2_0943_16 HRGMv2_0943_16_11 10241 11194 - Glucokinase
TC HRGMv2_0943_16 HRGMv2_0943_16_12 11436 11768 - 4.A.3.2.3
TC HRGMv2_0943_16 HRGMv2_0943_16_13 11778 12080 - 4.A.3.2.9
TC HRGMv2_0943_16 HRGMv2_0943_16_14 12239 13582 - 4.A.3.2.9
CAZyme HRGMv2_0943_16 HRGMv2_0943_16_15 13703 15103 - GH1
Gene ID: HRGMv2_0943_16_9
Type: TC
Location: 7525 - 8883 (-)
Gene ID: HRGMv2_0943_16_10
Type: pfam
Location: 9151 - 10074 (-)
Gene ID: HRGMv2_0943_16_11
Type: STP
Location: 10241 - 11194 (-)
Gene ID: HRGMv2_0943_16_12
Type: TC
Location: 11436 - 11768 (-)
Gene ID: HRGMv2_0943_16_13
Type: TC
Location: 11778 - 12080 (-)
Gene ID: HRGMv2_0943_16_14
Type: TC
Location: 12239 - 13582 (-)
Gene ID: HRGMv2_0943_16_15
Type: CAZyme
Location: 13703 - 15103 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0943_16_13 vegan > omnivore 1.05211 0.01057

🧭 Explore Read Mapping of CGC

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