dbCAN Logo

Cluster: HRGMv2_0942_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0942_6 HRGMv2_0942_6_1 239 721 + 4.A.6.1.5
sulfatase HRGMv2_0942_6 HRGMv2_0942_6_2 1044 2096 - S1_4
TF HRGMv2_0942_6 HRGMv2_0942_6_3 2303 3067 + HTH_DeoR
CAZyme HRGMv2_0942_6 HRGMv2_0942_6_4 3417 4838 - GH1
TC HRGMv2_0942_6 HRGMv2_0942_6_5 4915 6693 - 4.A.3.1.1
TF HRGMv2_0942_6 HRGMv2_0942_6_6 6978 7979 + LacI
TC HRGMv2_0942_6 HRGMv2_0942_6_7 8153 9913 - 4.A.3.1.1
CAZyme HRGMv2_0942_6 HRGMv2_0942_6_8 10089 11531 - GH1
TF HRGMv2_0942_6 HRGMv2_0942_6_9 11873 12910 + LacI
CAZyme HRGMv2_0942_6 HRGMv2_0942_6_10 13178 14617 - GH1
TC HRGMv2_0942_6 HRGMv2_0942_6_11 14688 16463 - 4.A.3.1.1
TF HRGMv2_0942_6 HRGMv2_0942_6_12 16821 17825 + LacI
TC HRGMv2_0942_6 HRGMv2_0942_6_13 18040 18378 + 4.A.3.1.2
Gene ID: HRGMv2_0942_6_1
Type: TC
Location: 239 - 721 (+)
Gene ID: HRGMv2_0942_6_2
Type: sulfatase
Location: 1044 - 2096 (-)
Gene ID: HRGMv2_0942_6_3
Type: TF
Location: 2303 - 3067 (+)
Gene ID: HRGMv2_0942_6_4
Type: CAZyme
Location: 3417 - 4838 (-)
Gene ID: HRGMv2_0942_6_5
Type: TC
Location: 4915 - 6693 (-)
Gene ID: HRGMv2_0942_6_6
Type: TF
Location: 6978 - 7979 (+)
Gene ID: HRGMv2_0942_6_7
Type: TC
Location: 8153 - 9913 (-)
Gene ID: HRGMv2_0942_6_8
Type: CAZyme
Location: 10089 - 11531 (-)
Gene ID: HRGMv2_0942_6_9
Type: TF
Location: 11873 - 12910 (+)
Gene ID: HRGMv2_0942_6_10
Type: CAZyme
Location: 13178 - 14617 (-)
Gene ID: HRGMv2_0942_6_11
Type: TC
Location: 14688 - 16463 (-)
Gene ID: HRGMv2_0942_6_12
Type: TF
Location: 16821 - 17825 (+)
Gene ID: HRGMv2_0942_6_13
Type: TC
Location: 18040 - 18378 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List