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Cluster: HRGMv2_0942_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0942_1 HRGMv2_0942_1_15 14423 15130 + 1.C.82.1.1
pfam HRGMv2_0942_1 HRGMv2_0942_1_16 15418 16128 - Metallophos | Metallophos_2
pfam HRGMv2_0942_1 HRGMv2_0942_1_17 16125 18041 - Bmp
TC HRGMv2_0942_1 HRGMv2_0942_1_18 18136 18903 - 1.A.23.4.10
TC HRGMv2_0942_1 HRGMv2_0942_1_19 19239 20033 - 3.A.1.34.1
TC HRGMv2_0942_1 HRGMv2_0942_1_20 20026 20949 - 3.A.1.34.1
TC HRGMv2_0942_1 HRGMv2_0942_1_21 21154 22134 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_0942_1 HRGMv2_0942_1_22 22294 23082 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0942_1 HRGMv2_0942_1_23 23331 24734 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_0942_1 HRGMv2_0942_1_24 24871 26790 - 9.B.97.5.1
TC HRGMv2_0942_1 HRGMv2_0942_1_25 27026 27589 - 4.A.1.2.6
peptidase HRGMv2_0942_1 HRGMv2_0942_1_26 27837 28736 + S09.UPW
TC HRGMv2_0942_1 HRGMv2_0942_1_27 29191 31551 + 9.A.8.1.6
TC HRGMv2_0942_1 HRGMv2_0942_1_28 31672 32868 + 2.A.1.2.18
CAZyme HRGMv2_0942_1 HRGMv2_0942_1_29 33022 34398 + GH13_20
Gene ID: HRGMv2_0942_1_15
Type: TC
Location: 14423 - 15130 (+)
Gene ID: HRGMv2_0942_1_16
Type: pfam
Location: 15418 - 16128 (-)
Gene ID: HRGMv2_0942_1_17
Type: pfam
Location: 16125 - 18041 (-)
Gene ID: HRGMv2_0942_1_18
Type: TC
Location: 18136 - 18903 (-)
Gene ID: HRGMv2_0942_1_19
Type: TC
Location: 19239 - 20033 (-)
Gene ID: HRGMv2_0942_1_20
Type: TC
Location: 20026 - 20949 (-)
Gene ID: HRGMv2_0942_1_21
Type: TC
Location: 21154 - 22134 (-)
Gene ID: HRGMv2_0942_1_22
Type:
Location: 22294 - 23082 (-)
Gene ID: HRGMv2_0942_1_23
Type: pfam
Location: 23331 - 24734 (-)
Gene ID: HRGMv2_0942_1_24
Type: TC
Location: 24871 - 26790 (-)
Gene ID: HRGMv2_0942_1_25
Type: TC
Location: 27026 - 27589 (-)
Gene ID: HRGMv2_0942_1_26
Type: peptidase
Location: 27837 - 28736 (+)
Gene ID: HRGMv2_0942_1_27
Type: TC
Location: 29191 - 31551 (+)
Gene ID: HRGMv2_0942_1_28
Type: TC
Location: 31672 - 32868 (+)
Gene ID: HRGMv2_0942_1_29
Type: CAZyme
Location: 33022 - 34398 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0942_1_24 vegan > omnivore 1.62292 0.00566
HRGMv2_0942_1_24 vegetarian > omnivore 1.52388 0.03469

🧭 Explore Read Mapping of CGC

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