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Cluster: HRGMv2_0942_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0942_22 HRGMv2_0942_22_10 8897 10402 + GH77
CAZyme HRGMv2_0942_22 HRGMv2_0942_22_11 10531 12798 + GT35
TC HRGMv2_0942_22 HRGMv2_0942_22_12 13333 14532 - 3.A.1.1.22
TC HRGMv2_0942_22 HRGMv2_0942_22_13 14601 15440 - 3.A.1.1.45
TC HRGMv2_0942_22 HRGMv2_0942_22_14 15440 16294 - 3.A.1.1.45
TC HRGMv2_0942_22 HRGMv2_0942_22_15 16382 17698 - 3.A.1.1.45
TF HRGMv2_0942_22 HRGMv2_0942_22_16 18005 18724 - GntR
NULL(UNKNOWN) HRGMv2_0942_22 HRGMv2_0942_22_17 18811 18927 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0942_22 HRGMv2_0942_22_18 18949 21402 + 4.A.1.1.8
Gene ID: HRGMv2_0942_22_10
Type: CAZyme
Location: 8897 - 10402 (+)
Gene ID: HRGMv2_0942_22_11
Type: CAZyme
Location: 10531 - 12798 (+)
Gene ID: HRGMv2_0942_22_12
Type: TC
Location: 13333 - 14532 (-)
Gene ID: HRGMv2_0942_22_13
Type: TC
Location: 14601 - 15440 (-)
Gene ID: HRGMv2_0942_22_14
Type: TC
Location: 15440 - 16294 (-)
Gene ID: HRGMv2_0942_22_15
Type: TC
Location: 16382 - 17698 (-)
Gene ID: HRGMv2_0942_22_16
Type: TF
Location: 18005 - 18724 (-)
Gene ID: HRGMv2_0942_22_17
Type:
Location: 18811 - 18927 (-)
Gene ID: HRGMv2_0942_22_18
Type: TC
Location: 18949 - 21402 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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