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Cluster: HRGMv2_0939_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0939_14 HRGMv2_0939_14_18 17676 18602 - CE7
TC HRGMv2_0939_14 HRGMv2_0939_14_19 18734 19561 - 3.A.1.5.27
TC HRGMv2_0939_14 HRGMv2_0939_14_20 19562 21577 - 3.A.1.5.25
TC HRGMv2_0939_14 HRGMv2_0939_14_21 21581 22537 - 3.A.1.5.38
TC HRGMv2_0939_14 HRGMv2_0939_14_22 22695 24308 - 3.A.1.5.27
pfam HRGMv2_0939_14 HRGMv2_0939_14_23 24673 26613 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0939_14 HRGMv2_0939_14_24 26620 28302 - 2.A.66.4.4
Gene ID: HRGMv2_0939_14_18
Type: CAZyme
Location: 17676 - 18602 (-)
Gene ID: HRGMv2_0939_14_19
Type: TC
Location: 18734 - 19561 (-)
Gene ID: HRGMv2_0939_14_20
Type: TC
Location: 19562 - 21577 (-)
Gene ID: HRGMv2_0939_14_21
Type: TC
Location: 21581 - 22537 (-)
Gene ID: HRGMv2_0939_14_22
Type: TC
Location: 22695 - 24308 (-)
Gene ID: HRGMv2_0939_14_23
Type: pfam
Location: 24673 - 26613 (-)
Gene ID: HRGMv2_0939_14_24
Type: TC
Location: 26620 - 28302 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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