dbCAN Logo

Cluster: HRGMv2_0939_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0939_2 HRGMv2_0939_2_51 60971 61765 - 3.A.1.34.1
TC HRGMv2_0939_2 HRGMv2_0939_2_52 61758 62681 - 3.A.1.34.1
TC HRGMv2_0939_2 HRGMv2_0939_2_53 62885 63865 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_0939_2 HRGMv2_0939_2_54 64026 64811 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0939_2 HRGMv2_0939_2_55 65072 66475 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_0939_2 HRGMv2_0939_2_56 66657 67220 - 4.A.1.2.6
peptidase HRGMv2_0939_2 HRGMv2_0939_2_57 67465 68367 + S09.UPW
TC HRGMv2_0939_2 HRGMv2_0939_2_58 68732 71092 + 9.A.8.1.6
TC HRGMv2_0939_2 HRGMv2_0939_2_59 71216 72412 + 2.A.1.2.18
CAZyme HRGMv2_0939_2 HRGMv2_0939_2_60 72519 73895 + GH13_20
Gene ID: HRGMv2_0939_2_51
Type: TC
Location: 60971 - 61765 (-)
Gene ID: HRGMv2_0939_2_52
Type: TC
Location: 61758 - 62681 (-)
Gene ID: HRGMv2_0939_2_53
Type: TC
Location: 62885 - 63865 (-)
Gene ID: HRGMv2_0939_2_54
Type:
Location: 64026 - 64811 (-)
Gene ID: HRGMv2_0939_2_55
Type: pfam
Location: 65072 - 66475 (-)
Gene ID: HRGMv2_0939_2_56
Type: TC
Location: 66657 - 67220 (-)
Gene ID: HRGMv2_0939_2_57
Type: peptidase
Location: 67465 - 68367 (+)
Gene ID: HRGMv2_0939_2_58
Type: TC
Location: 68732 - 71092 (+)
Gene ID: HRGMv2_0939_2_59
Type: TC
Location: 71216 - 72412 (+)
Gene ID: HRGMv2_0939_2_60
Type: CAZyme
Location: 72519 - 73895 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List