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Cluster: HRGMv2_0939_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0939_35 HRGMv2_0939_35_5 5263 6768 + GH77
CAZyme HRGMv2_0939_35 HRGMv2_0939_35_6 6897 9164 + GT35
TC HRGMv2_0939_35 HRGMv2_0939_35_7 9621 10820 - 3.A.1.1.22
TC HRGMv2_0939_35 HRGMv2_0939_35_8 10889 11728 - 3.A.1.1.45
TC HRGMv2_0939_35 HRGMv2_0939_35_9 11728 12582 - 3.A.1.1.45
TC HRGMv2_0939_35 HRGMv2_0939_35_10 12670 13986 - 3.A.1.1.45
TF HRGMv2_0939_35 HRGMv2_0939_35_11 14293 15012 - GntR
TC HRGMv2_0939_35 HRGMv2_0939_35_12 15242 17692 + 4.A.1.1.8
Gene ID: HRGMv2_0939_35_5
Type: CAZyme
Location: 5263 - 6768 (+)
Gene ID: HRGMv2_0939_35_6
Type: CAZyme
Location: 6897 - 9164 (+)
Gene ID: HRGMv2_0939_35_7
Type: TC
Location: 9621 - 10820 (-)
Gene ID: HRGMv2_0939_35_8
Type: TC
Location: 10889 - 11728 (-)
Gene ID: HRGMv2_0939_35_9
Type: TC
Location: 11728 - 12582 (-)
Gene ID: HRGMv2_0939_35_10
Type: TC
Location: 12670 - 13986 (-)
Gene ID: HRGMv2_0939_35_11
Type: TF
Location: 14293 - 15012 (-)
Gene ID: HRGMv2_0939_35_12
Type: TC
Location: 15242 - 17692 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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