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Cluster: HRGMv2_0939_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0939_17 HRGMv2_0939_17_28 25542 27236 + 4.A.3.1.1
NULL(UNKNOWN) HRGMv2_0939_17 HRGMv2_0939_17_29 27399 27668 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0939_17 HRGMv2_0939_17_30 27665 28897 - Fic
CAZyme HRGMv2_0939_17 HRGMv2_0939_17_31 29265 30686 - GH1
TC HRGMv2_0939_17 HRGMv2_0939_17_32 30762 32540 - 4.A.3.1.1
TF HRGMv2_0939_17 HRGMv2_0939_17_33 32816 33826 + LacI
TC HRGMv2_0939_17 HRGMv2_0939_17_34 34083 35843 - 4.A.3.1.1
CAZyme HRGMv2_0939_17 HRGMv2_0939_17_35 36020 37462 - GH1
Gene ID: HRGMv2_0939_17_28
Type: TC
Location: 25542 - 27236 (+)
Gene ID: HRGMv2_0939_17_29
Type:
Location: 27399 - 27668 (+)
Gene ID: HRGMv2_0939_17_30
Type: pfam
Location: 27665 - 28897 (-)
Gene ID: HRGMv2_0939_17_31
Type: CAZyme
Location: 29265 - 30686 (-)
Gene ID: HRGMv2_0939_17_32
Type: TC
Location: 30762 - 32540 (-)
Gene ID: HRGMv2_0939_17_33
Type: TF
Location: 32816 - 33826 (+)
Gene ID: HRGMv2_0939_17_34
Type: TC
Location: 34083 - 35843 (-)
Gene ID: HRGMv2_0939_17_35
Type: CAZyme
Location: 36020 - 37462 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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