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Cluster: HRGMv2_0936_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0936_4 HRGMv2_0936_4_43 42295 43989 + 4.A.3.1.1
STP HRGMv2_0936_4 HRGMv2_0936_4_44 44152 44547 + DeoRC
CAZyme HRGMv2_0936_4 HRGMv2_0936_4_45 45182 46603 - GH1
TC HRGMv2_0936_4 HRGMv2_0936_4_46 46679 48355 - 4.A.3.1.1
TF HRGMv2_0936_4 HRGMv2_0936_4_47 48742 49743 + LacI
TC HRGMv2_0936_4 HRGMv2_0936_4_48 50001 51761 - 4.A.3.1.1
CAZyme HRGMv2_0936_4 HRGMv2_0936_4_49 51938 53380 - GH1
TF HRGMv2_0936_4 HRGMv2_0936_4_50 53722 54759 + LacI
CAZyme HRGMv2_0936_4 HRGMv2_0936_4_51 55022 56461 - GH1
TC HRGMv2_0936_4 HRGMv2_0936_4_52 56528 57853 - 4.A.3.1.1
TC HRGMv2_0936_4 HRGMv2_0936_4_53 57874 58308 - 4.A.3.1.1
TF HRGMv2_0936_4 HRGMv2_0936_4_54 58665 59669 + LacI
TC HRGMv2_0936_4 HRGMv2_0936_4_55 59884 60222 + 4.A.3.1.2
Gene ID: HRGMv2_0936_4_43
Type: TC
Location: 42295 - 43989 (+)
Gene ID: HRGMv2_0936_4_44
Type: STP
Location: 44152 - 44547 (+)
Gene ID: HRGMv2_0936_4_45
Type: CAZyme
Location: 45182 - 46603 (-)
Gene ID: HRGMv2_0936_4_46
Type: TC
Location: 46679 - 48355 (-)
Gene ID: HRGMv2_0936_4_47
Type: TF
Location: 48742 - 49743 (+)
Gene ID: HRGMv2_0936_4_48
Type: TC
Location: 50001 - 51761 (-)
Gene ID: HRGMv2_0936_4_49
Type: CAZyme
Location: 51938 - 53380 (-)
Gene ID: HRGMv2_0936_4_50
Type: TF
Location: 53722 - 54759 (+)
Gene ID: HRGMv2_0936_4_51
Type: CAZyme
Location: 55022 - 56461 (-)
Gene ID: HRGMv2_0936_4_52
Type: TC
Location: 56528 - 57853 (-)
Gene ID: HRGMv2_0936_4_53
Type: TC
Location: 57874 - 58308 (-)
Gene ID: HRGMv2_0936_4_54
Type: TF
Location: 58665 - 59669 (+)
Gene ID: HRGMv2_0936_4_55
Type: TC
Location: 59884 - 60222 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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