dbCAN Logo

Cluster: HRGMv2_0936_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0936_23 HRGMv2_0936_23_5 7344 9761 - 4.A.1.1.8
TF HRGMv2_0936_23 HRGMv2_0936_23_6 10024 10743 + GntR
TC HRGMv2_0936_23 HRGMv2_0936_23_7 11050 12366 + 3.A.1.1.45
TC HRGMv2_0936_23 HRGMv2_0936_23_8 12454 13308 + 3.A.1.1.45
TC HRGMv2_0936_23 HRGMv2_0936_23_9 13308 14147 + 3.A.1.1.45
TC HRGMv2_0936_23 HRGMv2_0936_23_10 14216 15415 + 3.A.1.1.22
CAZyme HRGMv2_0936_23 HRGMv2_0936_23_11 15872 18139 - GT35
CAZyme HRGMv2_0936_23 HRGMv2_0936_23_12 18268 19773 - GH77
Gene ID: HRGMv2_0936_23_5
Type: TC
Location: 7344 - 9761 (-)
Gene ID: HRGMv2_0936_23_6
Type: TF
Location: 10024 - 10743 (+)
Gene ID: HRGMv2_0936_23_7
Type: TC
Location: 11050 - 12366 (+)
Gene ID: HRGMv2_0936_23_8
Type: TC
Location: 12454 - 13308 (+)
Gene ID: HRGMv2_0936_23_9
Type: TC
Location: 13308 - 14147 (+)
Gene ID: HRGMv2_0936_23_10
Type: TC
Location: 14216 - 15415 (+)
Gene ID: HRGMv2_0936_23_11
Type: CAZyme
Location: 15872 - 18139 (-)
Gene ID: HRGMv2_0936_23_12
Type: CAZyme
Location: 18268 - 19773 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List