dbCAN Logo

Cluster: HRGMv2_0935_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0935_20 HRGMv2_0935_20_6 8084 9589 + GH77
CAZyme HRGMv2_0935_20 HRGMv2_0935_20_7 9718 11985 + GT35
TC HRGMv2_0935_20 HRGMv2_0935_20_8 12442 13638 - 3.A.1.1.22
TC HRGMv2_0935_20 HRGMv2_0935_20_9 13707 14546 - 3.A.1.1.45
TC HRGMv2_0935_20 HRGMv2_0935_20_10 14546 15400 - 3.A.1.1.45
TC HRGMv2_0935_20 HRGMv2_0935_20_11 15488 16804 - 3.A.1.1.45
TF HRGMv2_0935_20 HRGMv2_0935_20_12 17111 17830 - GntR
NULL(UNKNOWN) HRGMv2_0935_20 HRGMv2_0935_20_13 17914 18033 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0935_20 HRGMv2_0935_20_14 18055 19710 + 4.A.1.1.8
Gene ID: HRGMv2_0935_20_6
Type: CAZyme
Location: 8084 - 9589 (+)
Gene ID: HRGMv2_0935_20_7
Type: CAZyme
Location: 9718 - 11985 (+)
Gene ID: HRGMv2_0935_20_8
Type: TC
Location: 12442 - 13638 (-)
Gene ID: HRGMv2_0935_20_9
Type: TC
Location: 13707 - 14546 (-)
Gene ID: HRGMv2_0935_20_10
Type: TC
Location: 14546 - 15400 (-)
Gene ID: HRGMv2_0935_20_11
Type: TC
Location: 15488 - 16804 (-)
Gene ID: HRGMv2_0935_20_12
Type: TF
Location: 17111 - 17830 (-)
Gene ID: HRGMv2_0935_20_13
Type:
Location: 17914 - 18033 (-)
Gene ID: HRGMv2_0935_20_14
Type: TC
Location: 18055 - 19710 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List