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Cluster: HRGMv2_0935_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0935_16 HRGMv2_0935_16_9 10257 11633 - GH13_20
TC HRGMv2_0935_16 HRGMv2_0935_16_10 11787 12983 - 2.A.1.2.18
TC HRGMv2_0935_16 HRGMv2_0935_16_11 13108 15468 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_0935_16 HRGMv2_0935_16_12 15590 15910 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_0935_16 HRGMv2_0935_16_13 15958 16857 - S09.UPW
TC HRGMv2_0935_16 HRGMv2_0935_16_14 17102 17665 + 4.A.1.2.6
pfam HRGMv2_0935_16 HRGMv2_0935_16_15 17847 19250 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_0935_16 HRGMv2_0935_16_16 19509 20294 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0935_16 HRGMv2_0935_16_17 20455 21435 + 3.A.1.34.1
Gene ID: HRGMv2_0935_16_9
Type: CAZyme
Location: 10257 - 11633 (-)
Gene ID: HRGMv2_0935_16_10
Type: TC
Location: 11787 - 12983 (-)
Gene ID: HRGMv2_0935_16_11
Type: TC
Location: 13108 - 15468 (-)
Gene ID: HRGMv2_0935_16_12
Type:
Location: 15590 - 15910 (-)
Gene ID: HRGMv2_0935_16_13
Type: peptidase
Location: 15958 - 16857 (-)
Gene ID: HRGMv2_0935_16_14
Type: TC
Location: 17102 - 17665 (+)
Gene ID: HRGMv2_0935_16_15
Type: pfam
Location: 17847 - 19250 (+)
Gene ID: HRGMv2_0935_16_16
Type:
Location: 19509 - 20294 (+)
Gene ID: HRGMv2_0935_16_17
Type: TC
Location: 20455 - 21435 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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