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Cluster: HRGMv2_0934_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0934_33 HRGMv2_0934_33_5 6677 8359 + 2.A.66.4.4
pfam HRGMv2_0934_33 HRGMv2_0934_33_6 8366 10306 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0934_33 HRGMv2_0934_33_7 10671 12284 + 3.A.1.5.27
TC HRGMv2_0934_33 HRGMv2_0934_33_8 12442 13398 + 3.A.1.5.38
TC HRGMv2_0934_33 HRGMv2_0934_33_9 13402 15417 + 3.A.1.5.25
TC HRGMv2_0934_33 HRGMv2_0934_33_10 15418 16245 + 3.A.1.5.27
CAZyme HRGMv2_0934_33 HRGMv2_0934_33_11 16377 17303 + CE7
Gene ID: HRGMv2_0934_33_5
Type: TC
Location: 6677 - 8359 (+)
Gene ID: HRGMv2_0934_33_6
Type: pfam
Location: 8366 - 10306 (+)
Gene ID: HRGMv2_0934_33_7
Type: TC
Location: 10671 - 12284 (+)
Gene ID: HRGMv2_0934_33_8
Type: TC
Location: 12442 - 13398 (+)
Gene ID: HRGMv2_0934_33_9
Type: TC
Location: 13402 - 15417 (+)
Gene ID: HRGMv2_0934_33_10
Type: TC
Location: 15418 - 16245 (+)
Gene ID: HRGMv2_0934_33_11
Type: CAZyme
Location: 16377 - 17303 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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