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Cluster: HRGMv2_0934_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0934_14 HRGMv2_0934_14_11 14876 17326 - 4.A.1.1.8
TF HRGMv2_0934_14 HRGMv2_0934_14_12 17556 18275 + GntR
TC HRGMv2_0934_14 HRGMv2_0934_14_13 18582 19898 + 3.A.1.1.45
TC HRGMv2_0934_14 HRGMv2_0934_14_14 19986 20840 + 3.A.1.1.45
TC HRGMv2_0934_14 HRGMv2_0934_14_15 20840 21679 + 3.A.1.1.45
TC HRGMv2_0934_14 HRGMv2_0934_14_16 21748 22947 + 3.A.1.1.22
CAZyme HRGMv2_0934_14 HRGMv2_0934_14_17 23403 25670 - GT35
CAZyme HRGMv2_0934_14 HRGMv2_0934_14_18 25800 27305 - GH77
Gene ID: HRGMv2_0934_14_11
Type: TC
Location: 14876 - 17326 (-)
Gene ID: HRGMv2_0934_14_12
Type: TF
Location: 17556 - 18275 (+)
Gene ID: HRGMv2_0934_14_13
Type: TC
Location: 18582 - 19898 (+)
Gene ID: HRGMv2_0934_14_14
Type: TC
Location: 19986 - 20840 (+)
Gene ID: HRGMv2_0934_14_15
Type: TC
Location: 20840 - 21679 (+)
Gene ID: HRGMv2_0934_14_16
Type: TC
Location: 21748 - 22947 (+)
Gene ID: HRGMv2_0934_14_17
Type: CAZyme
Location: 23403 - 25670 (-)
Gene ID: HRGMv2_0934_14_18
Type: CAZyme
Location: 25800 - 27305 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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