dbCAN Logo

Cluster: HRGMv2_0932_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0932_4 HRGMv2_0932_4_93 112059 112397 - 4.A.3.1.2
TF HRGMv2_0932_4 HRGMv2_0932_4_94 112612 113616 - LacI
TC HRGMv2_0932_4 HRGMv2_0932_4_95 113973 115748 + 4.A.3.1.1
CAZyme HRGMv2_0932_4 HRGMv2_0932_4_96 115815 117254 + GH1
TF HRGMv2_0932_4 HRGMv2_0932_4_97 117590 118600 - LacI
TC HRGMv2_0932_4 HRGMv2_0932_4_98 118876 120660 + 4.A.3.1.1
CAZyme HRGMv2_0932_4 HRGMv2_0932_4_99 120736 122157 + GH1
TF HRGMv2_0932_4 HRGMv2_0932_4_100 122353 123117 - HTH_DeoR
sulfatase HRGMv2_0932_4 HRGMv2_0932_4_101 123324 124376 + S1_4
TC HRGMv2_0932_4 HRGMv2_0932_4_102 124702 125184 - 4.A.6.1.5
Gene ID: HRGMv2_0932_4_93
Type: TC
Location: 112059 - 112397 (-)
Gene ID: HRGMv2_0932_4_94
Type: TF
Location: 112612 - 113616 (-)
Gene ID: HRGMv2_0932_4_95
Type: TC
Location: 113973 - 115748 (+)
Gene ID: HRGMv2_0932_4_96
Type: CAZyme
Location: 115815 - 117254 (+)
Gene ID: HRGMv2_0932_4_97
Type: TF
Location: 117590 - 118600 (-)
Gene ID: HRGMv2_0932_4_98
Type: TC
Location: 118876 - 120660 (+)
Gene ID: HRGMv2_0932_4_99
Type: CAZyme
Location: 120736 - 122157 (+)
Gene ID: HRGMv2_0932_4_100
Type: TF
Location: 122353 - 123117 (-)
Gene ID: HRGMv2_0932_4_101
Type: sulfatase
Location: 123324 - 124376 (+)
Gene ID: HRGMv2_0932_4_102
Type: TC
Location: 124702 - 125184 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List