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Cluster: HRGMv2_0932_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0932_24 HRGMv2_0932_24_12 11075 12001 - CE7
TC HRGMv2_0932_24 HRGMv2_0932_24_13 12133 12960 - 3.A.1.5.27
TC HRGMv2_0932_24 HRGMv2_0932_24_14 12961 14976 - 3.A.1.5.25
TC HRGMv2_0932_24 HRGMv2_0932_24_15 14980 15936 - 3.A.1.5.38
TC HRGMv2_0932_24 HRGMv2_0932_24_16 16094 17707 - 3.A.1.5.27
pfam HRGMv2_0932_24 HRGMv2_0932_24_17 18073 20013 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0932_24 HRGMv2_0932_24_18 20020 21702 - 2.A.66.4.4
Gene ID: HRGMv2_0932_24_12
Type: CAZyme
Location: 11075 - 12001 (-)
Gene ID: HRGMv2_0932_24_13
Type: TC
Location: 12133 - 12960 (-)
Gene ID: HRGMv2_0932_24_14
Type: TC
Location: 12961 - 14976 (-)
Gene ID: HRGMv2_0932_24_15
Type: TC
Location: 14980 - 15936 (-)
Gene ID: HRGMv2_0932_24_16
Type: TC
Location: 16094 - 17707 (-)
Gene ID: HRGMv2_0932_24_17
Type: pfam
Location: 18073 - 20013 (-)
Gene ID: HRGMv2_0932_24_18
Type: TC
Location: 20020 - 21702 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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