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Cluster: HRGMv2_0932_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0932_23 HRGMv2_0932_23_5 3810 4979 - CE9
STP HRGMv2_0932_23 HRGMv2_0932_23_6 5097 6263 - SIS | SIS
TF HRGMv2_0932_23 HRGMv2_0932_23_7 6378 7109 - GntR
TC HRGMv2_0932_23 HRGMv2_0932_23_8 7295 8377 - 4.A.6.1.4
TC HRGMv2_0932_23 HRGMv2_0932_23_9 8367 9167 - 4.A.6.1.4
TC HRGMv2_0932_23 HRGMv2_0932_23_10 9258 9740 - 4.A.6.1.4
pfam HRGMv2_0932_23 HRGMv2_0932_23_11 9777 10058 - YajC
TC HRGMv2_0932_23 HRGMv2_0932_23_12 10058 10501 - 4.A.6.1.16
Gene ID: HRGMv2_0932_23_5
Type: CAZyme
Location: 3810 - 4979 (-)
Gene ID: HRGMv2_0932_23_6
Type: STP
Location: 5097 - 6263 (-)
Gene ID: HRGMv2_0932_23_7
Type: TF
Location: 6378 - 7109 (-)
Gene ID: HRGMv2_0932_23_8
Type: TC
Location: 7295 - 8377 (-)
Gene ID: HRGMv2_0932_23_9
Type: TC
Location: 8367 - 9167 (-)
Gene ID: HRGMv2_0932_23_10
Type: TC
Location: 9258 - 9740 (-)
Gene ID: HRGMv2_0932_23_11
Type: pfam
Location: 9777 - 10058 (-)
Gene ID: HRGMv2_0932_23_12
Type: TC
Location: 10058 - 10501 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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