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Cluster: HRGMv2_0932_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0932_22 HRGMv2_0932_22_34 30830 32653 - GH13_30
STP HRGMv2_0932_22 HRGMv2_0932_22_35 33308 34054 - STAS
STP HRGMv2_0932_22 HRGMv2_0932_22_36 34136 36481 - GAF | SpoIIE
TC HRGMv2_0932_22 HRGMv2_0932_22_37 37229 38257 - 3.A.1.5.36
TC HRGMv2_0932_22 HRGMv2_0932_22_38 38257 39348 - 3.A.1.5.34
TC HRGMv2_0932_22 HRGMv2_0932_22_39 39351 40286 - 3.A.1.5.11
TC HRGMv2_0932_22 HRGMv2_0932_22_40 40301 41338 - 3.A.1.5.37
TC HRGMv2_0932_22 HRGMv2_0932_22_41 41495 43171 - 3.A.1.5.35
Gene ID: HRGMv2_0932_22_34
Type: CAZyme
Location: 30830 - 32653 (-)
Gene ID: HRGMv2_0932_22_35
Type: STP
Location: 33308 - 34054 (-)
Gene ID: HRGMv2_0932_22_36
Type: STP
Location: 34136 - 36481 (-)
Gene ID: HRGMv2_0932_22_37
Type: TC
Location: 37229 - 38257 (-)
Gene ID: HRGMv2_0932_22_38
Type: TC
Location: 38257 - 39348 (-)
Gene ID: HRGMv2_0932_22_39
Type: TC
Location: 39351 - 40286 (-)
Gene ID: HRGMv2_0932_22_40
Type: TC
Location: 40301 - 41338 (-)
Gene ID: HRGMv2_0932_22_41
Type: TC
Location: 41495 - 43171 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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