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Cluster: HRGMv2_0932_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0932_19 HRGMv2_0932_19_21 21657 23162 + GH77
CAZyme HRGMv2_0932_19 HRGMv2_0932_19_22 23291 25558 + GT35
TC HRGMv2_0932_19 HRGMv2_0932_19_23 25935 27134 - 3.A.1.1.22
TC HRGMv2_0932_19 HRGMv2_0932_19_24 27203 28042 - 3.A.1.1.45
TC HRGMv2_0932_19 HRGMv2_0932_19_25 28042 28896 - 3.A.1.1.45
TC HRGMv2_0932_19 HRGMv2_0932_19_26 28984 30300 - 3.A.1.1.45
TF HRGMv2_0932_19 HRGMv2_0932_19_27 30607 31326 - GntR
TC HRGMv2_0932_19 HRGMv2_0932_19_28 31556 34006 + 4.A.1.1.8
Gene ID: HRGMv2_0932_19_21
Type: CAZyme
Location: 21657 - 23162 (+)
Gene ID: HRGMv2_0932_19_22
Type: CAZyme
Location: 23291 - 25558 (+)
Gene ID: HRGMv2_0932_19_23
Type: TC
Location: 25935 - 27134 (-)
Gene ID: HRGMv2_0932_19_24
Type: TC
Location: 27203 - 28042 (-)
Gene ID: HRGMv2_0932_19_25
Type: TC
Location: 28042 - 28896 (-)
Gene ID: HRGMv2_0932_19_26
Type: TC
Location: 28984 - 30300 (-)
Gene ID: HRGMv2_0932_19_27
Type: TF
Location: 30607 - 31326 (-)
Gene ID: HRGMv2_0932_19_28
Type: TC
Location: 31556 - 34006 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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