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Cluster: HRGMv2_0932_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0932_14 HRGMv2_0932_14_28 32077 34416 - 3.A.3.5.15
STP HRGMv2_0932_14 HRGMv2_0932_14_29 34667 36751 - Pkinase
STP HRGMv2_0932_14 HRGMv2_0932_14_30 36925 37887 - FHA
TC HRGMv2_0932_14 HRGMv2_0932_14_31 38395 40656 + 1.I.1.1.3
STP HRGMv2_0932_14 HRGMv2_0932_14_32 41278 42039 + Fer4
TC HRGMv2_0932_14 HRGMv2_0932_14_33 42375 42896 + 4.A.1.2.5
pfam HRGMv2_0932_14 HRGMv2_0932_14_34 42903 43769 + PRD | PRD | CAT_RBD
TC HRGMv2_0932_14 HRGMv2_0932_14_35 43869 45485 + 4.A.1.1.3
CAZyme HRGMv2_0932_14 HRGMv2_0932_14_36 45489 46871 + GH4
Gene ID: HRGMv2_0932_14_28
Type: TC
Location: 32077 - 34416 (-)
Gene ID: HRGMv2_0932_14_29
Type: STP
Location: 34667 - 36751 (-)
Gene ID: HRGMv2_0932_14_30
Type: STP
Location: 36925 - 37887 (-)
Gene ID: HRGMv2_0932_14_31
Type: TC
Location: 38395 - 40656 (+)
Gene ID: HRGMv2_0932_14_32
Type: STP
Location: 41278 - 42039 (+)
Gene ID: HRGMv2_0932_14_33
Type: TC
Location: 42375 - 42896 (+)
Gene ID: HRGMv2_0932_14_34
Type: pfam
Location: 42903 - 43769 (+)
Gene ID: HRGMv2_0932_14_35
Type: TC
Location: 43869 - 45485 (+)
Gene ID: HRGMv2_0932_14_36
Type: CAZyme
Location: 45489 - 46871 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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