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Cluster: HRGMv2_0932_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0932_12 HRGMv2_0932_12_6 4089 5465 - GH13_20
TC HRGMv2_0932_12 HRGMv2_0932_12_7 5648 6844 - 2.A.1.2.18
TC HRGMv2_0932_12 HRGMv2_0932_12_8 6968 9328 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_0932_12 HRGMv2_0932_12_9 9450 9770 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_0932_12 HRGMv2_0932_12_10 9818 10717 - S09.UPW
TC HRGMv2_0932_12 HRGMv2_0932_12_11 10886 11527 + 4.A.1.2.6
pfam HRGMv2_0932_12 HRGMv2_0932_12_12 11709 13112 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_0932_12 HRGMv2_0932_12_13 13362 14147 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0932_12 HRGMv2_0932_12_14 14308 15288 + 3.A.1.34.1
TC HRGMv2_0932_12 HRGMv2_0932_12_15 15478 16401 + 3.A.1.34.1
TC HRGMv2_0932_12 HRGMv2_0932_12_16 16394 17188 + 3.A.1.34.1
pfam HRGMv2_0932_12 HRGMv2_0932_12_17 17346 19370 + Metallophos | 5_nucleotid_C
TC HRGMv2_0932_12 HRGMv2_0932_12_18 19499 20266 + 1.A.23.4.10
pfam HRGMv2_0932_12 HRGMv2_0932_12_19 20358 22274 + Bmp
pfam HRGMv2_0932_12 HRGMv2_0932_12_20 22271 22981 + Metallophos | Metallophos_2
TC HRGMv2_0932_12 HRGMv2_0932_12_21 23107 23814 - 1.C.82.1.1
Gene ID: HRGMv2_0932_12_6
Type: CAZyme
Location: 4089 - 5465 (-)
Gene ID: HRGMv2_0932_12_7
Type: TC
Location: 5648 - 6844 (-)
Gene ID: HRGMv2_0932_12_8
Type: TC
Location: 6968 - 9328 (-)
Gene ID: HRGMv2_0932_12_9
Type:
Location: 9450 - 9770 (-)
Gene ID: HRGMv2_0932_12_10
Type: peptidase
Location: 9818 - 10717 (-)
Gene ID: HRGMv2_0932_12_11
Type: TC
Location: 10886 - 11527 (+)
Gene ID: HRGMv2_0932_12_12
Type: pfam
Location: 11709 - 13112 (+)
Gene ID: HRGMv2_0932_12_13
Type:
Location: 13362 - 14147 (+)
Gene ID: HRGMv2_0932_12_14
Type: TC
Location: 14308 - 15288 (+)
Gene ID: HRGMv2_0932_12_15
Type: TC
Location: 15478 - 16401 (+)
Gene ID: HRGMv2_0932_12_16
Type: TC
Location: 16394 - 17188 (+)
Gene ID: HRGMv2_0932_12_17
Type: pfam
Location: 17346 - 19370 (+)
Gene ID: HRGMv2_0932_12_18
Type: TC
Location: 19499 - 20266 (+)
Gene ID: HRGMv2_0932_12_19
Type: pfam
Location: 20358 - 22274 (+)
Gene ID: HRGMv2_0932_12_20
Type: pfam
Location: 22271 - 22981 (+)
Gene ID: HRGMv2_0932_12_21
Type: TC
Location: 23107 - 23814 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0932_12_17 vegan > omnivore 1.74543 0.01560
HRGMv2_0932_12_17 vegetarian > omnivore 1.36018 0.01057

🧭 Explore Read Mapping of CGC

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