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Cluster: HRGMv2_0931_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0931_8 HRGMv2_0931_8_66 73603 74979 - GH13_20
TC HRGMv2_0931_8 HRGMv2_0931_8_67 75133 76329 - 2.A.1.2.18
NULL(UNKNOWN) HRGMv2_0931_8 HRGMv2_0931_8_68 76505 77257 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0931_8 HRGMv2_0931_8_69 77423 78796 - GH4
TF HRGMv2_0931_8 HRGMv2_0931_8_70 78972 79724 + HTH_6
TC HRGMv2_0931_8 HRGMv2_0931_8_71 79787 81451 - 4.A.1.1.3
TC HRGMv2_0931_8 HRGMv2_0931_8_72 81766 84126 - 9.A.8.1.6
TC HRGMv2_0931_8 HRGMv2_0931_8_73 84764 86227 - 2.A.3.2.3
Gene ID: HRGMv2_0931_8_66
Type: CAZyme
Location: 73603 - 74979 (-)
Gene ID: HRGMv2_0931_8_67
Type: TC
Location: 75133 - 76329 (-)
Gene ID: HRGMv2_0931_8_68
Type:
Location: 76505 - 77257 (-)
Gene ID: HRGMv2_0931_8_69
Type: CAZyme
Location: 77423 - 78796 (-)
Gene ID: HRGMv2_0931_8_70
Type: TF
Location: 78972 - 79724 (+)
Gene ID: HRGMv2_0931_8_71
Type: TC
Location: 79787 - 81451 (-)
Gene ID: HRGMv2_0931_8_72
Type: TC
Location: 81766 - 84126 (-)
Gene ID: HRGMv2_0931_8_73
Type: TC
Location: 84764 - 86227 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0931_8_68 vegan > omnivore 1.85008 0.02254
HRGMv2_0931_8_69 vegan > omnivore 1.56840 0.02254
HRGMv2_0931_8_73 vegan > omnivore 1.29266 0.02254

🧭 Explore Read Mapping of CGC

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