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Cluster: HRGMv2_0931_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0931_6 HRGMv2_0931_6_68 91714 93039 + GH4
TC HRGMv2_0931_6 HRGMv2_0931_6_69 93122 94684 + 4.A.1.1.3
TC HRGMv2_0931_6 HRGMv2_0931_6_70 94912 96282 - 2.A.1.2.25
NULL(UNKNOWN) HRGMv2_0931_6 HRGMv2_0931_6_71 96426 97292 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0931_6 HRGMv2_0931_6_72 97372 98265 + Aldose_epim
TC HRGMv2_0931_6 HRGMv2_0931_6_73 98475 99401 + 3.A.1.3.20
TC HRGMv2_0931_6 HRGMv2_0931_6_74 99411 100559 + 3.A.1.3.20
TC HRGMv2_0931_6 HRGMv2_0931_6_75 100582 101367 + 3.A.1.3.20
Gene ID: HRGMv2_0931_6_68
Type: CAZyme
Location: 91714 - 93039 (+)
Gene ID: HRGMv2_0931_6_69
Type: TC
Location: 93122 - 94684 (+)
Gene ID: HRGMv2_0931_6_70
Type: TC
Location: 94912 - 96282 (-)
Gene ID: HRGMv2_0931_6_71
Type:
Location: 96426 - 97292 (+)
Gene ID: HRGMv2_0931_6_72
Type: pfam
Location: 97372 - 98265 (+)
Gene ID: HRGMv2_0931_6_73
Type: TC
Location: 98475 - 99401 (+)
Gene ID: HRGMv2_0931_6_74
Type: TC
Location: 99411 - 100559 (+)
Gene ID: HRGMv2_0931_6_75
Type: TC
Location: 100582 - 101367 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0931_6_75 vegetarian > vegan 1.13767 0.00364

🧭 Explore Read Mapping of CGC

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