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Cluster: HRGMv2_0931_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0931_1 HRGMv2_0931_1_128 157041 160049 + GH2
NULL(UNKNOWN) HRGMv2_0931_1 HRGMv2_0931_1_129 160053 160508 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0931_1 HRGMv2_0931_1_130 160662 162125 + 2.A.3.7.4
STP HRGMv2_0931_1 HRGMv2_0931_1_131 162546 162794 + PTS-HPr
STP HRGMv2_0931_1 HRGMv2_0931_1_132 163027 163269 + FeoA
TC HRGMv2_0931_1 HRGMv2_0931_1_133 163309 163530 + 9.A.8.1.6
TC HRGMv2_0931_1 HRGMv2_0931_1_134 163654 165981 + 9.A.8.1.6
Gene ID: HRGMv2_0931_1_128
Type: CAZyme
Location: 157041 - 160049 (+)
Gene ID: HRGMv2_0931_1_129
Type:
Location: 160053 - 160508 (+)
Gene ID: HRGMv2_0931_1_130
Type: TC
Location: 160662 - 162125 (+)
Gene ID: HRGMv2_0931_1_131
Type: STP
Location: 162546 - 162794 (+)
Gene ID: HRGMv2_0931_1_132
Type: STP
Location: 163027 - 163269 (+)
Gene ID: HRGMv2_0931_1_133
Type: TC
Location: 163309 - 163530 (+)
Gene ID: HRGMv2_0931_1_134
Type: TC
Location: 163654 - 165981 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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