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Cluster: HRGMv2_0927_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0927_9 HRGMv2_0927_9_9 7788 9293 + GH77
CAZyme HRGMv2_0927_9 HRGMv2_0927_9_10 9422 11689 + GT35
TC HRGMv2_0927_9 HRGMv2_0927_9_11 12146 13345 - 3.A.1.1.22
TC HRGMv2_0927_9 HRGMv2_0927_9_12 13414 14253 - 3.A.1.1.45
TC HRGMv2_0927_9 HRGMv2_0927_9_13 14253 15107 - 3.A.1.1.45
TC HRGMv2_0927_9 HRGMv2_0927_9_14 15195 16511 - 3.A.1.1.45
TF HRGMv2_0927_9 HRGMv2_0927_9_15 16818 17537 - GntR
TC HRGMv2_0927_9 HRGMv2_0927_9_16 17800 20217 + 4.A.1.1.8
Gene ID: HRGMv2_0927_9_9
Type: CAZyme
Location: 7788 - 9293 (+)
Gene ID: HRGMv2_0927_9_10
Type: CAZyme
Location: 9422 - 11689 (+)
Gene ID: HRGMv2_0927_9_11
Type: TC
Location: 12146 - 13345 (-)
Gene ID: HRGMv2_0927_9_12
Type: TC
Location: 13414 - 14253 (-)
Gene ID: HRGMv2_0927_9_13
Type: TC
Location: 14253 - 15107 (-)
Gene ID: HRGMv2_0927_9_14
Type: TC
Location: 15195 - 16511 (-)
Gene ID: HRGMv2_0927_9_15
Type: TF
Location: 16818 - 17537 (-)
Gene ID: HRGMv2_0927_9_16
Type: TC
Location: 17800 - 20217 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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