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Cluster: HRGMv2_0926_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0926_1 HRGMv2_0926_1_250 267051 267977 - CE7
TC HRGMv2_0926_1 HRGMv2_0926_1_251 268109 268936 - 3.A.1.5.27
TC HRGMv2_0926_1 HRGMv2_0926_1_252 268937 270952 - 3.A.1.5.25
TC HRGMv2_0926_1 HRGMv2_0926_1_253 270956 271912 - 3.A.1.5.38
TC HRGMv2_0926_1 HRGMv2_0926_1_254 272070 273683 - 3.A.1.5.27
pfam HRGMv2_0926_1 HRGMv2_0926_1_255 274049 275989 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0926_1 HRGMv2_0926_1_256 275996 277678 - 2.A.66.4.4
Gene ID: HRGMv2_0926_1_250
Type: CAZyme
Location: 267051 - 267977 (-)
Gene ID: HRGMv2_0926_1_251
Type: TC
Location: 268109 - 268936 (-)
Gene ID: HRGMv2_0926_1_252
Type: TC
Location: 268937 - 270952 (-)
Gene ID: HRGMv2_0926_1_253
Type: TC
Location: 270956 - 271912 (-)
Gene ID: HRGMv2_0926_1_254
Type: TC
Location: 272070 - 273683 (-)
Gene ID: HRGMv2_0926_1_255
Type: pfam
Location: 274049 - 275989 (-)
Gene ID: HRGMv2_0926_1_256
Type: TC
Location: 275996 - 277678 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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