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Cluster: HRGMv2_0926_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0926_22 HRGMv2_0926_22_10 11652 13157 + GH77
CAZyme HRGMv2_0926_22 HRGMv2_0926_22_11 13286 15553 + GT35
TC HRGMv2_0926_22 HRGMv2_0926_22_12 16011 17210 - 3.A.1.1.22
TC HRGMv2_0926_22 HRGMv2_0926_22_13 17279 18118 - 3.A.1.1.45
TC HRGMv2_0926_22 HRGMv2_0926_22_14 18118 18972 - 3.A.1.1.45
TC HRGMv2_0926_22 HRGMv2_0926_22_15 19061 20377 - 3.A.1.1.45
TF HRGMv2_0926_22 HRGMv2_0926_22_16 20684 21403 - GntR
NULL(UNKNOWN) HRGMv2_0926_22 HRGMv2_0926_22_17 21487 21606 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0926_22 HRGMv2_0926_22_18 21628 24078 + 4.A.1.1.8
Gene ID: HRGMv2_0926_22_10
Type: CAZyme
Location: 11652 - 13157 (+)
Gene ID: HRGMv2_0926_22_11
Type: CAZyme
Location: 13286 - 15553 (+)
Gene ID: HRGMv2_0926_22_12
Type: TC
Location: 16011 - 17210 (-)
Gene ID: HRGMv2_0926_22_13
Type: TC
Location: 17279 - 18118 (-)
Gene ID: HRGMv2_0926_22_14
Type: TC
Location: 18118 - 18972 (-)
Gene ID: HRGMv2_0926_22_15
Type: TC
Location: 19061 - 20377 (-)
Gene ID: HRGMv2_0926_22_16
Type: TF
Location: 20684 - 21403 (-)
Gene ID: HRGMv2_0926_22_17
Type:
Location: 21487 - 21606 (-)
Gene ID: HRGMv2_0926_22_18
Type: TC
Location: 21628 - 24078 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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