dbCAN Logo

Cluster: HRGMv2_0926_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0926_10 HRGMv2_0926_10_3 2738 3793 + 2.A.98.1.4
pfam HRGMv2_0926_10 HRGMv2_0926_10_4 3984 4964 + HTH_38
TC HRGMv2_0926_10 HRGMv2_0926_10_5 5284 6732 - 4.A.1.2.6
CAZyme HRGMv2_0926_10 HRGMv2_0926_10_6 6764 8065 - GH1
TC HRGMv2_0926_10 HRGMv2_0926_10_7 8127 9215 - 2.A.7.3.62
STP HRGMv2_0926_10 HRGMv2_0926_10_8 9891 11921 + Pyr_redox_2
TF HRGMv2_0926_10 HRGMv2_0926_10_9 12361 12765 + 0039939
TC HRGMv2_0926_10 HRGMv2_0926_10_10 13052 15934 + 3.D.1.4.2
TC HRGMv2_0926_10 HRGMv2_0926_10_11 15947 16567 + 3.D.1.4.2
pfam HRGMv2_0926_10 HRGMv2_0926_10_12 16567 17283 + Complex1_30kDa
TC HRGMv2_0926_10 HRGMv2_0926_10_13 17289 18377 + 3.D.1.4.2
Gene ID: HRGMv2_0926_10_3
Type: TC
Location: 2738 - 3793 (+)
Gene ID: HRGMv2_0926_10_4
Type: pfam
Location: 3984 - 4964 (+)
Gene ID: HRGMv2_0926_10_5
Type: TC
Location: 5284 - 6732 (-)
Gene ID: HRGMv2_0926_10_6
Type: CAZyme
Location: 6764 - 8065 (-)
Gene ID: HRGMv2_0926_10_7
Type: TC
Location: 8127 - 9215 (-)
Gene ID: HRGMv2_0926_10_8
Type: STP
Location: 9891 - 11921 (+)
Gene ID: HRGMv2_0926_10_9
Type: TF
Location: 12361 - 12765 (+)
Gene ID: HRGMv2_0926_10_10
Type: TC
Location: 13052 - 15934 (+)
Gene ID: HRGMv2_0926_10_11
Type: TC
Location: 15947 - 16567 (+)
Gene ID: HRGMv2_0926_10_12
Type: pfam
Location: 16567 - 17283 (+)
Gene ID: HRGMv2_0926_10_13
Type: TC
Location: 17289 - 18377 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0926_10_5 vegan > omnivore 1.20211 0.01560
HRGMv2_0926_10_6 vegan > omnivore 1.13370 0.01560

🧭 Explore Read Mapping of CGC

← Back to Cluster List