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Cluster: HRGMv2_0924_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0924_3 HRGMv2_0924_3_68 74094 75452 - 2.A.33.1.1
pfam HRGMv2_0924_3 HRGMv2_0924_3_69 75720 76643 - DHH | DHHA2
pfam HRGMv2_0924_3 HRGMv2_0924_3_70 76810 77763 - ROK
TC HRGMv2_0924_3 HRGMv2_0924_3_71 78005 78337 - 4.A.3.2.3
TC HRGMv2_0924_3 HRGMv2_0924_3_72 78347 78649 - 4.A.3.2.9
TC HRGMv2_0924_3 HRGMv2_0924_3_73 78811 80154 - 4.A.3.2.9
CAZyme HRGMv2_0924_3 HRGMv2_0924_3_74 80274 81674 - GH1
Gene ID: HRGMv2_0924_3_68
Type: TC
Location: 74094 - 75452 (-)
Gene ID: HRGMv2_0924_3_69
Type: pfam
Location: 75720 - 76643 (-)
Gene ID: HRGMv2_0924_3_70
Type: pfam
Location: 76810 - 77763 (-)
Gene ID: HRGMv2_0924_3_71
Type: TC
Location: 78005 - 78337 (-)
Gene ID: HRGMv2_0924_3_72
Type: TC
Location: 78347 - 78649 (-)
Gene ID: HRGMv2_0924_3_73
Type: TC
Location: 78811 - 80154 (-)
Gene ID: HRGMv2_0924_3_74
Type: CAZyme
Location: 80274 - 81674 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0924_3_72 vegan > omnivore 1.02777 0.02695

🧭 Explore Read Mapping of CGC

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