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Cluster: HRGMv2_0924_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0924_22 HRGMv2_0924_22_9 8833 10338 + GH77
CAZyme HRGMv2_0924_22 HRGMv2_0924_22_10 10468 12735 + GT35
TC HRGMv2_0924_22 HRGMv2_0924_22_11 13193 14392 - 3.A.1.1.22
TC HRGMv2_0924_22 HRGMv2_0924_22_12 14461 15300 - 3.A.1.1.45
TC HRGMv2_0924_22 HRGMv2_0924_22_13 15300 16154 - 3.A.1.1.45
TC HRGMv2_0924_22 HRGMv2_0924_22_14 16242 17558 - 3.A.1.1.45
TF HRGMv2_0924_22 HRGMv2_0924_22_15 17865 18584 - GntR
TC HRGMv2_0924_22 HRGMv2_0924_22_16 18814 21264 + 4.A.1.1.8
Gene ID: HRGMv2_0924_22_9
Type: CAZyme
Location: 8833 - 10338 (+)
Gene ID: HRGMv2_0924_22_10
Type: CAZyme
Location: 10468 - 12735 (+)
Gene ID: HRGMv2_0924_22_11
Type: TC
Location: 13193 - 14392 (-)
Gene ID: HRGMv2_0924_22_12
Type: TC
Location: 14461 - 15300 (-)
Gene ID: HRGMv2_0924_22_13
Type: TC
Location: 15300 - 16154 (-)
Gene ID: HRGMv2_0924_22_14
Type: TC
Location: 16242 - 17558 (-)
Gene ID: HRGMv2_0924_22_15
Type: TF
Location: 17865 - 18584 (-)
Gene ID: HRGMv2_0924_22_16
Type: TC
Location: 18814 - 21264 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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