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Cluster: HRGMv2_0924_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0924_15 HRGMv2_0924_15_10 13589 15838 + 2.A.66.4.4
pfam HRGMv2_0924_15 HRGMv2_0924_15_11 15845 17785 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0924_15 HRGMv2_0924_15_12 18150 19763 + 3.A.1.5.27
TC HRGMv2_0924_15 HRGMv2_0924_15_13 19921 20877 + 3.A.1.5.38
TC HRGMv2_0924_15 HRGMv2_0924_15_14 20881 22896 + 3.A.1.5.25
TC HRGMv2_0924_15 HRGMv2_0924_15_15 22897 23724 + 3.A.1.5.27
CAZyme HRGMv2_0924_15 HRGMv2_0924_15_16 23856 24782 + CE7
Gene ID: HRGMv2_0924_15_10
Type: TC
Location: 13589 - 15838 (+)
Gene ID: HRGMv2_0924_15_11
Type: pfam
Location: 15845 - 17785 (+)
Gene ID: HRGMv2_0924_15_12
Type: TC
Location: 18150 - 19763 (+)
Gene ID: HRGMv2_0924_15_13
Type: TC
Location: 19921 - 20877 (+)
Gene ID: HRGMv2_0924_15_14
Type: TC
Location: 20881 - 22896 (+)
Gene ID: HRGMv2_0924_15_15
Type: TC
Location: 22897 - 23724 (+)
Gene ID: HRGMv2_0924_15_16
Type: CAZyme
Location: 23856 - 24782 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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