dbCAN Logo

Cluster: HRGMv2_0923_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0923_3 HRGMv2_0923_3_82 96050 97930 + 9.B.18.2.1
STP HRGMv2_0923_3 HRGMv2_0923_3_83 97948 99165 + Aminotran_1_2
TC HRGMv2_0923_3 HRGMv2_0923_3_84 99434 99856 + 9.B.18.1.3
CAZyme HRGMv2_0923_3 HRGMv2_0923_3_85 99857 100609 + GT2
pfam HRGMv2_0923_3 HRGMv2_0923_3_86 100629 101711 + Glycos_transf_1 | Glyco_trans_1_4
CAZyme HRGMv2_0923_3 HRGMv2_0923_3_87 101812 102834 + GT4
pfam HRGMv2_0923_3 HRGMv2_0923_3_88 102835 103923 + EpsG
CAZyme HRGMv2_0923_3 HRGMv2_0923_3_89 103981 105054 + GT4
Gene ID: HRGMv2_0923_3_82
Type: TC
Location: 96050 - 97930 (+)
Gene ID: HRGMv2_0923_3_83
Type: STP
Location: 97948 - 99165 (+)
Gene ID: HRGMv2_0923_3_84
Type: TC
Location: 99434 - 99856 (+)
Gene ID: HRGMv2_0923_3_85
Type: CAZyme
Location: 99857 - 100609 (+)
Gene ID: HRGMv2_0923_3_86
Type: pfam
Location: 100629 - 101711 (+)
Gene ID: HRGMv2_0923_3_87
Type: CAZyme
Location: 101812 - 102834 (+)
Gene ID: HRGMv2_0923_3_88
Type: pfam
Location: 102835 - 103923 (+)
Gene ID: HRGMv2_0923_3_89
Type: CAZyme
Location: 103981 - 105054 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List