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Cluster: HRGMv2_0921_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0921_3 HRGMv2_0921_3_11 9453 11129 + 3.A.1.5.35
TC HRGMv2_0921_3 HRGMv2_0921_3_12 11286 12323 + 3.A.1.5.37
TC HRGMv2_0921_3 HRGMv2_0921_3_13 12338 13273 + 3.A.1.5.11
TC HRGMv2_0921_3 HRGMv2_0921_3_14 13276 14367 + 3.A.1.5.34
TC HRGMv2_0921_3 HRGMv2_0921_3_15 14367 15395 + 3.A.1.5.36
STP HRGMv2_0921_3 HRGMv2_0921_3_16 16136 18481 + GAF | SpoIIE
STP HRGMv2_0921_3 HRGMv2_0921_3_17 18560 19306 + STAS
CAZyme HRGMv2_0921_3 HRGMv2_0921_3_18 20050 21783 + GH13_30
Gene ID: HRGMv2_0921_3_11
Type: TC
Location: 9453 - 11129 (+)
Gene ID: HRGMv2_0921_3_12
Type: TC
Location: 11286 - 12323 (+)
Gene ID: HRGMv2_0921_3_13
Type: TC
Location: 12338 - 13273 (+)
Gene ID: HRGMv2_0921_3_14
Type: TC
Location: 13276 - 14367 (+)
Gene ID: HRGMv2_0921_3_15
Type: TC
Location: 14367 - 15395 (+)
Gene ID: HRGMv2_0921_3_16
Type: STP
Location: 16136 - 18481 (+)
Gene ID: HRGMv2_0921_3_17
Type: STP
Location: 18560 - 19306 (+)
Gene ID: HRGMv2_0921_3_18
Type: CAZyme
Location: 20050 - 21783 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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