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Cluster: HRGMv2_0921_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0921_34 HRGMv2_0921_34_5 5262 6767 + GH77
CAZyme HRGMv2_0921_34 HRGMv2_0921_34_6 6896 9163 + GT35
TC HRGMv2_0921_34 HRGMv2_0921_34_7 9620 10819 - 3.A.1.1.22
TC HRGMv2_0921_34 HRGMv2_0921_34_8 10888 11727 - 3.A.1.1.45
TC HRGMv2_0921_34 HRGMv2_0921_34_9 11727 12581 - 3.A.1.1.45
TC HRGMv2_0921_34 HRGMv2_0921_34_10 12669 13985 - 3.A.1.1.45
TF HRGMv2_0921_34 HRGMv2_0921_34_11 14292 15011 - GntR
TC HRGMv2_0921_34 HRGMv2_0921_34_12 15241 17691 + 4.A.1.1.8
Gene ID: HRGMv2_0921_34_5
Type: CAZyme
Location: 5262 - 6767 (+)
Gene ID: HRGMv2_0921_34_6
Type: CAZyme
Location: 6896 - 9163 (+)
Gene ID: HRGMv2_0921_34_7
Type: TC
Location: 9620 - 10819 (-)
Gene ID: HRGMv2_0921_34_8
Type: TC
Location: 10888 - 11727 (-)
Gene ID: HRGMv2_0921_34_9
Type: TC
Location: 11727 - 12581 (-)
Gene ID: HRGMv2_0921_34_10
Type: TC
Location: 12669 - 13985 (-)
Gene ID: HRGMv2_0921_34_11
Type: TF
Location: 14292 - 15011 (-)
Gene ID: HRGMv2_0921_34_12
Type: TC
Location: 15241 - 17691 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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