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Cluster: HRGMv2_0921_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0921_33 HRGMv2_0921_33_10 13594 15276 + 2.A.66.4.4
pfam HRGMv2_0921_33 HRGMv2_0921_33_11 15283 17223 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0921_33 HRGMv2_0921_33_12 17588 19201 + 3.A.1.5.27
TC HRGMv2_0921_33 HRGMv2_0921_33_13 19359 20315 + 3.A.1.5.38
TC HRGMv2_0921_33 HRGMv2_0921_33_14 20319 22334 + 3.A.1.5.25
TC HRGMv2_0921_33 HRGMv2_0921_33_15 22335 23162 + 3.A.1.5.27
CAZyme HRGMv2_0921_33 HRGMv2_0921_33_16 23294 24220 + CE7
Gene ID: HRGMv2_0921_33_10
Type: TC
Location: 13594 - 15276 (+)
Gene ID: HRGMv2_0921_33_11
Type: pfam
Location: 15283 - 17223 (+)
Gene ID: HRGMv2_0921_33_12
Type: TC
Location: 17588 - 19201 (+)
Gene ID: HRGMv2_0921_33_13
Type: TC
Location: 19359 - 20315 (+)
Gene ID: HRGMv2_0921_33_14
Type: TC
Location: 20319 - 22334 (+)
Gene ID: HRGMv2_0921_33_15
Type: TC
Location: 22335 - 23162 (+)
Gene ID: HRGMv2_0921_33_16
Type: CAZyme
Location: 23294 - 24220 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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