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Cluster: HRGMv2_0920_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0920_2 HRGMv2_0920_2_15 21073 23400 - 9.A.8.1.6
TC HRGMv2_0920_2 HRGMv2_0920_2_16 23524 23745 - 9.A.8.1.6
STP HRGMv2_0920_2 HRGMv2_0920_2_17 23785 24027 - FeoA
STP HRGMv2_0920_2 HRGMv2_0920_2_18 24216 24464 - PTS-HPr
TC HRGMv2_0920_2 HRGMv2_0920_2_19 24886 26010 - 2.A.3.7.4
TC HRGMv2_0920_2 HRGMv2_0920_2_20 26078 26350 - 2.A.3.7.4
NULL(UNKNOWN) HRGMv2_0920_2 HRGMv2_0920_2_21 26504 26959 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0920_2 HRGMv2_0920_2_22 26963 29971 - GH2
Gene ID: HRGMv2_0920_2_15
Type: TC
Location: 21073 - 23400 (-)
Gene ID: HRGMv2_0920_2_16
Type: TC
Location: 23524 - 23745 (-)
Gene ID: HRGMv2_0920_2_17
Type: STP
Location: 23785 - 24027 (-)
Gene ID: HRGMv2_0920_2_18
Type: STP
Location: 24216 - 24464 (-)
Gene ID: HRGMv2_0920_2_19
Type: TC
Location: 24886 - 26010 (-)
Gene ID: HRGMv2_0920_2_20
Type: TC
Location: 26078 - 26350 (-)
Gene ID: HRGMv2_0920_2_21
Type:
Location: 26504 - 26959 (-)
Gene ID: HRGMv2_0920_2_22
Type: CAZyme
Location: 26963 - 29971 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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