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Cluster: HRGMv2_0920_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0920_31 HRGMv2_0920_31_2 594 2099 + GH77
CAZyme HRGMv2_0920_31 HRGMv2_0920_31_3 2228 4495 + GT35
TC HRGMv2_0920_31 HRGMv2_0920_31_4 4869 6068 - 3.A.1.1.22
TC HRGMv2_0920_31 HRGMv2_0920_31_5 6137 6976 - 3.A.1.1.45
TC HRGMv2_0920_31 HRGMv2_0920_31_6 6976 7830 - 3.A.1.1.45
TC HRGMv2_0920_31 HRGMv2_0920_31_7 7918 9234 - 3.A.1.1.45
TF HRGMv2_0920_31 HRGMv2_0920_31_8 9541 10260 - GntR
TC HRGMv2_0920_31 HRGMv2_0920_31_9 10490 12940 + 4.A.1.1.8
Gene ID: HRGMv2_0920_31_2
Type: CAZyme
Location: 594 - 2099 (+)
Gene ID: HRGMv2_0920_31_3
Type: CAZyme
Location: 2228 - 4495 (+)
Gene ID: HRGMv2_0920_31_4
Type: TC
Location: 4869 - 6068 (-)
Gene ID: HRGMv2_0920_31_5
Type: TC
Location: 6137 - 6976 (-)
Gene ID: HRGMv2_0920_31_6
Type: TC
Location: 6976 - 7830 (-)
Gene ID: HRGMv2_0920_31_7
Type: TC
Location: 7918 - 9234 (-)
Gene ID: HRGMv2_0920_31_8
Type: TF
Location: 9541 - 10260 (-)
Gene ID: HRGMv2_0920_31_9
Type: TC
Location: 10490 - 12940 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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