dbCAN Logo

Cluster: HRGMv2_0920_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0920_1 HRGMv2_0920_1_87 104716 105510 - 3.A.1.34.1
TC HRGMv2_0920_1 HRGMv2_0920_1_88 105503 106426 - 3.A.1.34.1
TC HRGMv2_0920_1 HRGMv2_0920_1_89 106630 107610 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_0920_1 HRGMv2_0920_1_90 107771 108559 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0920_1 HRGMv2_0920_1_91 108818 110221 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_0920_1 HRGMv2_0920_1_92 110403 110966 - 4.A.1.2.6
peptidase HRGMv2_0920_1 HRGMv2_0920_1_93 111210 112112 + S09.UPW
TC HRGMv2_0920_1 HRGMv2_0920_1_94 112297 114657 + 9.A.8.1.6
TC HRGMv2_0920_1 HRGMv2_0920_1_95 114781 115977 + 2.A.1.2.18
CAZyme HRGMv2_0920_1 HRGMv2_0920_1_96 116131 117507 + GH13_20
Gene ID: HRGMv2_0920_1_87
Type: TC
Location: 104716 - 105510 (-)
Gene ID: HRGMv2_0920_1_88
Type: TC
Location: 105503 - 106426 (-)
Gene ID: HRGMv2_0920_1_89
Type: TC
Location: 106630 - 107610 (-)
Gene ID: HRGMv2_0920_1_90
Type:
Location: 107771 - 108559 (-)
Gene ID: HRGMv2_0920_1_91
Type: pfam
Location: 108818 - 110221 (-)
Gene ID: HRGMv2_0920_1_92
Type: TC
Location: 110403 - 110966 (-)
Gene ID: HRGMv2_0920_1_93
Type: peptidase
Location: 111210 - 112112 (+)
Gene ID: HRGMv2_0920_1_94
Type: TC
Location: 112297 - 114657 (+)
Gene ID: HRGMv2_0920_1_95
Type: TC
Location: 114781 - 115977 (+)
Gene ID: HRGMv2_0920_1_96
Type: CAZyme
Location: 116131 - 117507 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List