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Cluster: HRGMv2_0918_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0918_15 HRGMv2_0918_15_3 1995 2921 - CE7
TC HRGMv2_0918_15 HRGMv2_0918_15_4 3053 3880 - 3.A.1.5.27
TC HRGMv2_0918_15 HRGMv2_0918_15_5 3881 5896 - 3.A.1.5.25
TC HRGMv2_0918_15 HRGMv2_0918_15_6 5900 6856 - 3.A.1.5.38
TC HRGMv2_0918_15 HRGMv2_0918_15_7 7014 8627 - 3.A.1.5.27
pfam HRGMv2_0918_15 HRGMv2_0918_15_8 8993 10933 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0918_15 HRGMv2_0918_15_9 10940 12622 - 2.A.66.4.4
Gene ID: HRGMv2_0918_15_3
Type: CAZyme
Location: 1995 - 2921 (-)
Gene ID: HRGMv2_0918_15_4
Type: TC
Location: 3053 - 3880 (-)
Gene ID: HRGMv2_0918_15_5
Type: TC
Location: 3881 - 5896 (-)
Gene ID: HRGMv2_0918_15_6
Type: TC
Location: 5900 - 6856 (-)
Gene ID: HRGMv2_0918_15_7
Type: TC
Location: 7014 - 8627 (-)
Gene ID: HRGMv2_0918_15_8
Type: pfam
Location: 8993 - 10933 (-)
Gene ID: HRGMv2_0918_15_9
Type: TC
Location: 10940 - 12622 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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