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Cluster: HRGMv2_0918_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0918_55 HRGMv2_0918_55_1 1 423 - 4.A.1.1.8
TF HRGMv2_0918_55 HRGMv2_0918_55_2 651 1370 + GntR
TC HRGMv2_0918_55 HRGMv2_0918_55_3 1677 2993 + 3.A.1.1.45
TC HRGMv2_0918_55 HRGMv2_0918_55_4 3081 3935 + 3.A.1.1.45
TC HRGMv2_0918_55 HRGMv2_0918_55_5 3935 4774 + 3.A.1.1.45
TC HRGMv2_0918_55 HRGMv2_0918_55_6 4843 6042 + 3.A.1.1.22
CAZyme HRGMv2_0918_55 HRGMv2_0918_55_7 6420 8687 - GT35
CAZyme HRGMv2_0918_55 HRGMv2_0918_55_8 8816 10321 - GH77
Gene ID: HRGMv2_0918_55_1
Type: TC
Location: 1 - 423 (-)
Gene ID: HRGMv2_0918_55_2
Type: TF
Location: 651 - 1370 (+)
Gene ID: HRGMv2_0918_55_3
Type: TC
Location: 1677 - 2993 (+)
Gene ID: HRGMv2_0918_55_4
Type: TC
Location: 3081 - 3935 (+)
Gene ID: HRGMv2_0918_55_5
Type: TC
Location: 3935 - 4774 (+)
Gene ID: HRGMv2_0918_55_6
Type: TC
Location: 4843 - 6042 (+)
Gene ID: HRGMv2_0918_55_7
Type: CAZyme
Location: 6420 - 8687 (-)
Gene ID: HRGMv2_0918_55_8
Type: CAZyme
Location: 8816 - 10321 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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