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Cluster: HRGMv2_0917_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0917_2 HRGMv2_0917_2_23 22848 24206 - 2.A.33.1.1
pfam HRGMv2_0917_2 HRGMv2_0917_2_24 24473 25396 - DHH | DHHA2
STP HRGMv2_0917_2 HRGMv2_0917_2_25 25544 26497 - Glucokinase
TC HRGMv2_0917_2 HRGMv2_0917_2_26 26739 27071 - 4.A.3.2.3
TC HRGMv2_0917_2 HRGMv2_0917_2_27 27081 27383 - 4.A.3.2.9
TC HRGMv2_0917_2 HRGMv2_0917_2_28 27537 28889 - 4.A.3.2.2
CAZyme HRGMv2_0917_2 HRGMv2_0917_2_29 29010 30410 - GH1
Gene ID: HRGMv2_0917_2_23
Type: TC
Location: 22848 - 24206 (-)
Gene ID: HRGMv2_0917_2_24
Type: pfam
Location: 24473 - 25396 (-)
Gene ID: HRGMv2_0917_2_25
Type: STP
Location: 25544 - 26497 (-)
Gene ID: HRGMv2_0917_2_26
Type: TC
Location: 26739 - 27071 (-)
Gene ID: HRGMv2_0917_2_27
Type: TC
Location: 27081 - 27383 (-)
Gene ID: HRGMv2_0917_2_28
Type: TC
Location: 27537 - 28889 (-)
Gene ID: HRGMv2_0917_2_29
Type: CAZyme
Location: 29010 - 30410 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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