Cluster: HRGMv2_0916_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0916
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0916_7 | HRGMv2_0916_7_61 | 72185 | 72850 | + | 9.B.18.1.2 |
| NULL(UNKNOWN) | HRGMv2_0916_7 | HRGMv2_0916_7_62 | 72701 | 73192 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0916_7 | HRGMv2_0916_7_63 | 73890 | 74990 | + | GT2 |
| pfam | HRGMv2_0916_7 | HRGMv2_0916_7_64 | 74990 | 76090 | + | PS_pyruv_trans |
| CAZyme | HRGMv2_0916_7 | HRGMv2_0916_7_65 | 76091 | 77191 | + | GT4 |
| pfam | HRGMv2_0916_7 | HRGMv2_0916_7_66 | 77184 | 78416 | + | Wzy_C |
| CAZyme | HRGMv2_0916_7 | HRGMv2_0916_7_67 | 78403 | 79386 | + | GT2 |
Gene ID: HRGMv2_0916_7_61
Type: TC
Location: 72185 - 72850 (+)
Type: TC
Location: 72185 - 72850 (+)
Gene ID: HRGMv2_0916_7_62
Type:
Location: 72701 - 73192 (-)
Type:
Location: 72701 - 73192 (-)
Gene ID: HRGMv2_0916_7_63
Type: CAZyme
Location: 73890 - 74990 (+)
Type: CAZyme
Location: 73890 - 74990 (+)
Gene ID: HRGMv2_0916_7_64
Type: pfam
Location: 74990 - 76090 (+)
Type: pfam
Location: 74990 - 76090 (+)
Gene ID: HRGMv2_0916_7_65
Type: CAZyme
Location: 76091 - 77191 (+)
Type: CAZyme
Location: 76091 - 77191 (+)
Gene ID: HRGMv2_0916_7_66
Type: pfam
Location: 77184 - 78416 (+)
Type: pfam
Location: 77184 - 78416 (+)
Gene ID: HRGMv2_0916_7_67
Type: CAZyme
Location: 78403 - 79386 (+)
Type: CAZyme
Location: 78403 - 79386 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902491915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.