dbCAN Logo

Cluster: HRGMv2_0916_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0916_33 HRGMv2_0916_33_1 2 1918 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_0916_33 HRGMv2_0916_33_2 1940 2059 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0916_33 HRGMv2_0916_33_3 2143 2862 + GntR
TC HRGMv2_0916_33 HRGMv2_0916_33_4 3169 4485 + 3.A.1.1.45
TC HRGMv2_0916_33 HRGMv2_0916_33_5 4573 5427 + 3.A.1.1.45
TC HRGMv2_0916_33 HRGMv2_0916_33_6 5427 6266 + 3.A.1.1.45
TC HRGMv2_0916_33 HRGMv2_0916_33_7 6335 7534 + 3.A.1.1.22
CAZyme HRGMv2_0916_33 HRGMv2_0916_33_8 7991 10258 - GT35
CAZyme HRGMv2_0916_33 HRGMv2_0916_33_9 10387 11892 - GH77
Gene ID: HRGMv2_0916_33_1
Type: TC
Location: 2 - 1918 (-)
Gene ID: HRGMv2_0916_33_2
Type:
Location: 1940 - 2059 (+)
Gene ID: HRGMv2_0916_33_3
Type: TF
Location: 2143 - 2862 (+)
Gene ID: HRGMv2_0916_33_4
Type: TC
Location: 3169 - 4485 (+)
Gene ID: HRGMv2_0916_33_5
Type: TC
Location: 4573 - 5427 (+)
Gene ID: HRGMv2_0916_33_6
Type: TC
Location: 5427 - 6266 (+)
Gene ID: HRGMv2_0916_33_7
Type: TC
Location: 6335 - 7534 (+)
Gene ID: HRGMv2_0916_33_8
Type: CAZyme
Location: 7991 - 10258 (-)
Gene ID: HRGMv2_0916_33_9
Type: CAZyme
Location: 10387 - 11892 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List