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Cluster: HRGMv2_0916_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0916_22 HRGMv2_0916_22_6 4818 5156 - 4.A.3.1.2
TF HRGMv2_0916_22 HRGMv2_0916_22_7 5371 6375 - LacI
TC HRGMv2_0916_22 HRGMv2_0916_22_8 6734 8509 + 4.A.3.1.1
CAZyme HRGMv2_0916_22 HRGMv2_0916_22_9 8576 10015 + GH1
TF HRGMv2_0916_22 HRGMv2_0916_22_10 10285 11322 - LacI
CAZyme HRGMv2_0916_22 HRGMv2_0916_22_11 11664 13106 + GH1
TC HRGMv2_0916_22 HRGMv2_0916_22_12 13283 15043 + 4.A.3.1.1
TF HRGMv2_0916_22 HRGMv2_0916_22_13 15382 16392 - LacI
TC HRGMv2_0916_22 HRGMv2_0916_22_14 16667 18424 + 4.A.3.1.1
CAZyme HRGMv2_0916_22 HRGMv2_0916_22_15 18500 19921 + GH1
Gene ID: HRGMv2_0916_22_6
Type: TC
Location: 4818 - 5156 (-)
Gene ID: HRGMv2_0916_22_7
Type: TF
Location: 5371 - 6375 (-)
Gene ID: HRGMv2_0916_22_8
Type: TC
Location: 6734 - 8509 (+)
Gene ID: HRGMv2_0916_22_9
Type: CAZyme
Location: 8576 - 10015 (+)
Gene ID: HRGMv2_0916_22_10
Type: TF
Location: 10285 - 11322 (-)
Gene ID: HRGMv2_0916_22_11
Type: CAZyme
Location: 11664 - 13106 (+)
Gene ID: HRGMv2_0916_22_12
Type: TC
Location: 13283 - 15043 (+)
Gene ID: HRGMv2_0916_22_13
Type: TF
Location: 15382 - 16392 (-)
Gene ID: HRGMv2_0916_22_14
Type: TC
Location: 16667 - 18424 (+)
Gene ID: HRGMv2_0916_22_15
Type: CAZyme
Location: 18500 - 19921 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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