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Cluster: HRGMv2_0916_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0916_17 HRGMv2_0916_17_10 13628 15310 + 2.A.66.4.4
pfam HRGMv2_0916_17 HRGMv2_0916_17_11 15317 17257 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0916_17 HRGMv2_0916_17_12 17621 19234 + 3.A.1.5.27
TC HRGMv2_0916_17 HRGMv2_0916_17_13 19392 20348 + 3.A.1.5.38
TC HRGMv2_0916_17 HRGMv2_0916_17_14 20352 22367 + 3.A.1.5.25
TC HRGMv2_0916_17 HRGMv2_0916_17_15 22368 23195 + 3.A.1.5.27
CAZyme HRGMv2_0916_17 HRGMv2_0916_17_16 23327 24253 + CE7
Gene ID: HRGMv2_0916_17_10
Type: TC
Location: 13628 - 15310 (+)
Gene ID: HRGMv2_0916_17_11
Type: pfam
Location: 15317 - 17257 (+)
Gene ID: HRGMv2_0916_17_12
Type: TC
Location: 17621 - 19234 (+)
Gene ID: HRGMv2_0916_17_13
Type: TC
Location: 19392 - 20348 (+)
Gene ID: HRGMv2_0916_17_14
Type: TC
Location: 20352 - 22367 (+)
Gene ID: HRGMv2_0916_17_15
Type: TC
Location: 22368 - 23195 (+)
Gene ID: HRGMv2_0916_17_16
Type: CAZyme
Location: 23327 - 24253 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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