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Cluster: HRGMv2_0914_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0914_19 HRGMv2_0914_19_5 3405 3848 + 4.A.6.1.16
pfam HRGMv2_0914_19 HRGMv2_0914_19_6 3848 4129 + YajC
TC HRGMv2_0914_19 HRGMv2_0914_19_7 4166 4648 + 4.A.6.1.4
TC HRGMv2_0914_19 HRGMv2_0914_19_8 4739 5539 + 4.A.6.1.4
TC HRGMv2_0914_19 HRGMv2_0914_19_9 5529 6611 + 4.A.6.1.4
TF HRGMv2_0914_19 HRGMv2_0914_19_10 6797 7528 + GntR
STP HRGMv2_0914_19 HRGMv2_0914_19_11 7643 8809 + SIS | SIS
CAZyme HRGMv2_0914_19 HRGMv2_0914_19_12 8927 10096 + CE9
Gene ID: HRGMv2_0914_19_5
Type: TC
Location: 3405 - 3848 (+)
Gene ID: HRGMv2_0914_19_6
Type: pfam
Location: 3848 - 4129 (+)
Gene ID: HRGMv2_0914_19_7
Type: TC
Location: 4166 - 4648 (+)
Gene ID: HRGMv2_0914_19_8
Type: TC
Location: 4739 - 5539 (+)
Gene ID: HRGMv2_0914_19_9
Type: TC
Location: 5529 - 6611 (+)
Gene ID: HRGMv2_0914_19_10
Type: TF
Location: 6797 - 7528 (+)
Gene ID: HRGMv2_0914_19_11
Type: STP
Location: 7643 - 8809 (+)
Gene ID: HRGMv2_0914_19_12
Type: CAZyme
Location: 8927 - 10096 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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