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Cluster: HRGMv2_0914_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0914_17 HRGMv2_0914_17_17 16614 17540 - CE7
TC HRGMv2_0914_17 HRGMv2_0914_17_18 17672 18499 - 3.A.1.5.27
TC HRGMv2_0914_17 HRGMv2_0914_17_19 18500 20515 - 3.A.1.5.25
TC HRGMv2_0914_17 HRGMv2_0914_17_20 20519 21475 - 3.A.1.5.38
TC HRGMv2_0914_17 HRGMv2_0914_17_21 21633 23246 - 3.A.1.5.27
pfam HRGMv2_0914_17 HRGMv2_0914_17_22 23611 25551 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0914_17 HRGMv2_0914_17_23 25558 27240 - 2.A.66.4.4
Gene ID: HRGMv2_0914_17_17
Type: CAZyme
Location: 16614 - 17540 (-)
Gene ID: HRGMv2_0914_17_18
Type: TC
Location: 17672 - 18499 (-)
Gene ID: HRGMv2_0914_17_19
Type: TC
Location: 18500 - 20515 (-)
Gene ID: HRGMv2_0914_17_20
Type: TC
Location: 20519 - 21475 (-)
Gene ID: HRGMv2_0914_17_21
Type: TC
Location: 21633 - 23246 (-)
Gene ID: HRGMv2_0914_17_22
Type: pfam
Location: 23611 - 25551 (-)
Gene ID: HRGMv2_0914_17_23
Type: TC
Location: 25558 - 27240 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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