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Cluster: HRGMv2_0912_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0912_38 HRGMv2_0912_38_1 2 1177 - 4.A.3.1.1
CAZyme HRGMv2_0912_38 HRGMv2_0912_38_2 1354 2796 - GH1
TF HRGMv2_0912_38 HRGMv2_0912_38_3 3138 4175 + LacI
CAZyme HRGMv2_0912_38 HRGMv2_0912_38_4 4443 5882 - GH1
TC HRGMv2_0912_38 HRGMv2_0912_38_5 5949 7724 - 4.A.3.1.1
TF HRGMv2_0912_38 HRGMv2_0912_38_6 8082 9086 + LacI
TC HRGMv2_0912_38 HRGMv2_0912_38_7 9301 9639 + 4.A.3.1.2
Gene ID: HRGMv2_0912_38_1
Type: TC
Location: 2 - 1177 (-)
Gene ID: HRGMv2_0912_38_2
Type: CAZyme
Location: 1354 - 2796 (-)
Gene ID: HRGMv2_0912_38_3
Type: TF
Location: 3138 - 4175 (+)
Gene ID: HRGMv2_0912_38_4
Type: CAZyme
Location: 4443 - 5882 (-)
Gene ID: HRGMv2_0912_38_5
Type: TC
Location: 5949 - 7724 (-)
Gene ID: HRGMv2_0912_38_6
Type: TF
Location: 8082 - 9086 (+)
Gene ID: HRGMv2_0912_38_7
Type: TC
Location: 9301 - 9639 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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