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Cluster: HRGMv2_0912_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0912_15 HRGMv2_0912_15_4 3923 5605 + 2.A.66.4.4
pfam HRGMv2_0912_15 HRGMv2_0912_15_5 5612 7552 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0912_15 HRGMv2_0912_15_6 7918 9531 + 3.A.1.5.27
TC HRGMv2_0912_15 HRGMv2_0912_15_7 9687 10643 + 3.A.1.5.38
TC HRGMv2_0912_15 HRGMv2_0912_15_8 10647 12662 + 3.A.1.5.25
TC HRGMv2_0912_15 HRGMv2_0912_15_9 12663 13490 + 3.A.1.5.27
CAZyme HRGMv2_0912_15 HRGMv2_0912_15_10 13622 14548 + CE7
Gene ID: HRGMv2_0912_15_4
Type: TC
Location: 3923 - 5605 (+)
Gene ID: HRGMv2_0912_15_5
Type: pfam
Location: 5612 - 7552 (+)
Gene ID: HRGMv2_0912_15_6
Type: TC
Location: 7918 - 9531 (+)
Gene ID: HRGMv2_0912_15_7
Type: TC
Location: 9687 - 10643 (+)
Gene ID: HRGMv2_0912_15_8
Type: TC
Location: 10647 - 12662 (+)
Gene ID: HRGMv2_0912_15_9
Type: TC
Location: 12663 - 13490 (+)
Gene ID: HRGMv2_0912_15_10
Type: CAZyme
Location: 13622 - 14548 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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